PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DSN52
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 213aa    MW: 24480.7 Da    PI: 4.8269
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DSN52genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.62.6e-145497755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A+eYI++Lq
  Aradu.DSN52 54 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIEYIQKLQ 97
                 57*********************66......******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.7744796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.23E-1848114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.50E-1350101No hitNo description
SMARTSM003534.8E-1653102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-1753112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.3E-125497IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MENIGDEYHR YWETSMFLQT QELDNWGLDE ALSGYYDSSS PDGAASSAAS KNIVSERNRR  60
KKLNERLFAL RSVVPNISKM DKASIIKDAI EYIQKLQEQE RIIQSEIVEL ESGMMVEKKN  120
PNSYEFEHQE LPVLLRSKKK RTDELYDSLN SRNSPIHILE LRVTYMGEKT IVVSLTCSKR  180
TDTMADEEEK DLLQIKIQTA IAALNDPLSP MSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960052.11e-150PREDICTED: transcription factor bHLH35
SwissprotQ2HIV94e-67BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A0B2RMT51e-121A0A0B2RMT5_GLYSO; Transcription factor bHLH35
TrEMBLC6TGE01e-121C6TGE0_SOYBN; BHLH transcription factor
STRINGGLYMA09G06770.11e-120(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33893369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-59bHLH family protein